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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17047009_17047487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17047009 - 17047487

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTACAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CATGCTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

86.4

29.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

61.8

0.27

1.1

56.2

42.9

Minor 5ss

-1.7

3.3

46.3

Minor BPS

0.64

1.4

76.34

41.1

Associated Gene:

Gene:

TMEM177

Ensembl Gene ID:

ENSAPLG00000001672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046677

17046484 - 17048623

2140