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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1707590_1710122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1707590 - 1710122

Intron Length:

2533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTACATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TTGTGCTTACTT

Flanking Amino Acid:

TRQRSHSAGEVGEDSRHSGP

Intron Amino Acid Position:

1040

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

67.6

0.44

1.2

Major PPT

78.1

0.63

0.9

40.5

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

58.6

0.35

2.1

79.19

43.7

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198