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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17114455_17125830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17114455 - 17125830

Intron Length:

11376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTGCCTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.8

0.42

1.1

67.9

38.1

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

52.2

-0

2.2

69.58

43.3

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047684

17114387 - 17192872

78486