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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1712528_1716641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1712528 - 1716641

Intron Length:

4114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTTACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

TATTTTAGAACT

Flanking Amino Acid:

QPDLTRNHSLREKIQFIRTE

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

0.5

39.8

Major PPT

71.5

0.49

69.8

40.6

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

57.3

0.31

1.7

78.77

36.9

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198