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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17137409_17140966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17137409 - 17140966

Intron Length:

3558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTAATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

DPNKLQEEYTRYQYFLQIKQ

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.7

0.38

1.2

73.5

40.2

Minor 5ss

36.4

-1.5

3.3

49.3

46.9

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047684

17114387 - 17192872

78486

ENSAPLT00000037396

17092881 - 17192872

99992

ENSAPLT00000014341

17125831 - 17192872

67042