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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17144783_17145755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17144783 - 17145755

Intron Length:

973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTATTTGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGCTGTTTAAAT

Flanking Amino Acid:

LYGVELHYARNLSSLCSEIA

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

78.8

38.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

82.1

0.72

0.9

81.4

36.1

Minor 5ss

43.4

-0.7

2.8

46.2

Minor BPS

56.7

0.29

1.9

73.53

43.4

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037396

17092881 - 17192872

99992

ENSAPLT00000047684

17114387 - 17192872

78486