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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17145798_17146183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17145798 - 17146183

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTTTTTCAAAC

Flanking Amino Acid:

LCSEIAISFQDQSNNEIMIG

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

80.2

0.68

82.4

26.6

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

0.2

1.6

68.3

36.9

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047684

17114387 - 17192872

78486

ENSAPLT00000037396

17092881 - 17192872

99992