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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17146273_17151354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17146273 - 17151354

Intron Length:

5082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTATTTTTCATT

Flanking Amino Acid:

KNRVRINTFPWLKIVKISFK

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

80.5

33.7

Major BPS

100

1.24

0.5

100

Major PPT

79.9

0.67

0.8

79.1

33.9

Minor 5ss

-1.6

3.3

45.4

43.9

Minor BPS

61.3

0.44

1.7

79.64

37.1

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047684

17114387 - 17192872

78486

ENSAPLT00000037396

17092881 - 17192872

99992

ENSAPLT00000014341

17125831 - 17192872

67042