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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17161598_17168962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17161598 - 17168962

Intron Length:

7365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

ATTATTTTACTT

Flanking Amino Acid:

ERANKDRVFARSPSKPLARK

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

87.8

0.85

0.6

81.5

30.6

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

56.9

0.3

1.6

74.03

37.5

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037396

17092881 - 17192872

99992

ENSAPLT00000014341

17125831 - 17192872

67042

ENSAPLT00000047684

17114387 - 17192872

78486