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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1716726_1718015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1716726 - 1718015

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

SSDADLVMLLSLFEEEIMSY

Intron Amino Acid Position:

1134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.9

0.67

0.9

74.1

39.7

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198