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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17170508_17175658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17170508 - 17175658

Intron Length:

5151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTGGTACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TTTACTTCTATT

Flanking Amino Acid:

QANSIILESSPSQETPIDGQ

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

79.1

37.5

Major BPS

85.7

0.89

0.8

22.2

Major PPT

71.4

0.48

0.9

70.2

40.4

Minor 5ss

-0.2

2.8

71.9

38.1

Minor BPS

52.5

0.16

1.9

76.84

39.8

Associated Gene:

Gene:

PTPN4

Ensembl Gene ID:

ENSAPLG00000013704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037396

17092881 - 17192872

99992

ENSAPLT00000014341

17125831 - 17192872

67042

ENSAPLT00000047684

17114387 - 17192872

78486