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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1718126_1722093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1718126 - 1722093

Intron Length:

3968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCTTTGTTTATT

Flanking Amino Acid:

SPVSSPQNSPGTQRANARAP

Intron Amino Acid Position:

1171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

82.3

32.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.9

0.83

0.7

81.8

30.1

Minor 5ss

40.5

-1.1

2.8

44.2

Minor BPS

49.6

0.05

2.3

74.69

42.7

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198