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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17209665_17213187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17209665 - 17213187

Intron Length:

3523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTACTGATGATT

Flanking Amino Acid:

LRFMDSAQVAHWLDNTKSIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

43.8

-0.4

2.2

65.59

39.1

Associated Gene:

Gene:

EPB41L5

Ensembl Gene ID:

ENSAPLG00000014391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017734

17200486 - 17247469

46984

ENSAPLT00000015065

17200486 - 17249121

48636