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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17213231_17214381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17213231 - 17214381

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

GCTGTCTCAAAT

Flanking Amino Acid:

NTKSIKKQVKIGPPYCLHFR

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.5

28.6

Major BPS

58.9

0.22

49.8

35.1

Major PPT

92.1

0.95

0.6

88.1

21.8

Minor 5ss

-1.2

3.3

52.8

38.5

Minor BPS

49.4

0.04

1.8

65.7

44.7

Associated Gene:

Gene:

EPB41L5

Ensembl Gene ID:

ENSAPLG00000014391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017734

17200486 - 17247469

46984

ENSAPLT00000015065

17200486 - 17249121

48636