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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17220825_17221459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17220825 - 17221459

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TAATCTTTATTT

Flanking Amino Acid:

MYGVDMHIVKARDGNDYSLG

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

64.5

0.33

0.9

62.8

38.7

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

65.4

0.56

1.5

77.84

38.8

Associated Gene:

Gene:

EPB41L5

Ensembl Gene ID:

ENSAPLG00000014391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017734

17200486 - 17247469

46984

ENSAPLT00000015065

17200486 - 17249121

48636