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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17221549_17222384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17221549 - 17222384

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCATCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TAAGCCTAACCT

Flanking Amino Acid:

EGDTKIGLFFWPKITRLDFK

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.1

37.2

Major BPS

84.8

0.86

85.7

34.9

Major PPT

80.2

0.68

0.9

73.4

36.7

Minor 5ss

46.6

-0.3

2.8

62.9

42.7

Minor BPS

49.3

0.03

2.1

69.7

46.8

Associated Gene:

Gene:

EPB41L5

Ensembl Gene ID:

ENSAPLG00000014391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017734

17200486 - 17247469

46984

ENSAPLT00000015065

17200486 - 17249121

48636