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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1722215_1724394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1722215 - 1724394

Intron Length:

2180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTGCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATGAATT

Flanking Amino Acid:

KGYGQGPGKLKLIIRRDHLL

Intron Amino Acid Position:

1211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

70.4

36.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

87.8

0.85

0.7

85.4

29.3

Minor 5ss

47.4

-0.3

2.4

57.5

45.2

Minor BPS

0.55

1.7

83.39

37.1

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016094

1636265 - 1797462

161198

ENSAPLT00000032573

1636216 - 1741852

105637