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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17223334_17224527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17223334 - 17224527

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGGCATCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AAGTAATTAATC

Flanking Amino Acid:

FIRLGSRFRYSGKTEYQTTK

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

0.82

0.8

24.9

Major PPT

0.36

0.9

63.2

38.5

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

51.3

0.02

1.8

60.51

38.3

Associated Gene:

Gene:

EPB41L5

Ensembl Gene ID:

ENSAPLG00000014391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017734

17200486 - 17247469

46984

ENSAPLT00000015065

17200486 - 17249121

48636