Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_17238080_17238870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17238080 - 17238870

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGCAAC

5'SS Class:

major

3'SS Sequence:

CTGTCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

TCAGGAATAACG

Flanking Amino Acid:

ETSNEKTDSDPFEDALLKLK

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.4

63.6

42.9

Major BPS

52.4

0.06

1.2

37.3

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

41.5

-0.9

2.9

56.6

41.1

Minor BPS

40.3

-0.8

2.2

46.1

Associated Gene:

Gene:

EPB41L5

Ensembl Gene ID:

ENSAPLG00000014391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017734

17200486 - 17247469

46984

ENSAPLT00000015065

17200486 - 17249121

48636