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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1724509_1728194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1724509 - 1728194

Intron Length:

3686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TTCTCTTTAAAG

Flanking Amino Acid:

KLYVTFVGEEGLDYSGPSRE

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.1

38.4

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

0.7

82.3

26.9

Minor 5ss

29.2

-2.4

2.5

36.7

Minor BPS

71.5

0.54

1.4

72.3

40.7

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198