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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17265893_17273088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17265893 - 17273088

Intron Length:

7196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTTAT

5'SS Class:

major

3'SS Sequence:

TGACTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGTTTTTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

77.7

33.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

81.8

0.72

0.9

37.8

Minor 5ss

42.2

-0.9

3.2

57.4

41.7

Minor BPS

75.1

0.87

1.1

85.97

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042139

17259374 - 17273204

13831