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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17318012_17329251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17318012 - 17329251

Intron Length:

11240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTTTCTGTCAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

0.63

0.9

74.4

35.1

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

46.5

-0.2

2.6

69.26

Associated Gene:

Gene:

RALB

Ensembl Gene ID:

ENSAPLG00000017843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022276

17317832 - 17335532

17701