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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1733156_1733728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1733156 - 1733728

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGTAA

U12 Branch Point Sequence:

TTTCCTTTCACA

Flanking Amino Acid:

TESLVRGFYEVVDARLVSVF

Intron Amino Acid Position:

1426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

50.6

0.02

1.4

52.1

43.5

Major PPT

87.6

0.85

0.7

83.3

25.1

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

68.2

0.57

1.7

80.59

35.2

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198