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Intron Name: Anas_platyrhynchos_platyrhynchos_7_1733844_1734561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1733844 - 1734561

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CTTGTTTTAACA

Flanking Amino Acid:

DWRNNTEYRGGYHDNHIVIR

Intron Amino Acid Position:

1464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

80.5

0.69

0.9

76.7

36.2

Minor 5ss

42.2

-0.9

2.9

59.5

Minor BPS

68.8

0.59

1.4

73.92

38.7

Associated Gene:

Gene:

HECW2

Ensembl Gene ID:

ENSAPLG00000015383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032573

1636216 - 1741852

105637

ENSAPLT00000016094

1636265 - 1797462

161198