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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17374682_17389168_F

Intron Information:

Intron Rank:

144620

Intron Class:

major

Intron Phase:

Intron Coordinates:

17374682 - 17389168

Intron Length:

14487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

ATAGCCTGACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

76.3

30.6

Major BPS

64.9

0.37

37.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

33.6

-1.9

2.8

31.7

42.6

Minor BPS

49.4

0.03

1.8

68.01

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027904

17374597 - 17389380

14784