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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17375384_17389168_F

Intron Information:

Intron Rank:

144619

Intron Class:

major

Intron Phase:

Intron Coordinates:

17375384 - 17389168

Intron Length:

13785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

ATAGCCTGACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

64.9

0.37

37.5

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

49.4

0.03

1.8

68.01

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032068

17375070 - 17390291

15222

ENSAPLT00000026725

17374515 - 17389291

14777