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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17439778_17460925_R

Intron Information:

Intron Rank:

142248

Intron Class:

major

Intron Phase:

Intron Coordinates:

17439778 - 17460925

Intron Length:

21148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TGCAAGTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

72.5

0.56

1.1

63.4

Major PPT

0.74

0.7

74.2

30.9

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

40.9

-0.6

2.4

58.27

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031113

17439398 - 17462036

22639