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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17523724_17561273_F

Intron Information:

Intron Rank:

140887

Intron Class:

major

Intron Phase:

Intron Coordinates:

17523724 - 17561273

Intron Length:

37550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAATTG

5'SS Class:

major

3'SS Sequence:

TCTTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTGTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

67.5

38.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.9

0.87

0.7

83.5

31.2

Minor 5ss

-0.3

2.9

64.3

47.2

Minor BPS

0.46

1.6

74.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034294

17523117 - 17562489

39373