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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17545347_17561273_F

Intron Information:

Intron Rank:

140885

Intron Class:

major

Intron Phase:

Intron Coordinates:

17545347 - 17561273

Intron Length:

15927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TCTTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTGTTCTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

88.9

0.87

0.7

83.5

31.2

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

0.46

1.6

74.68

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030744

17544405 - 17561979

17575