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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17562096_17567972_F

Intron Information:

Intron Rank:

140892

Intron Class:

major

Intron Phase:

Intron Coordinates:

17562096 - 17567972

Intron Length:

5877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAC

5'SS Class:

major

3'SS Sequence:

GCTTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTAAAAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

40.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.3

0.73

0.8

73.6

Minor 5ss

30.9

-2.2

3.3

41.2

45.5

Minor BPS

47.6

-0.1

2.1

68.86

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041704

17562000 - 17572884

10885