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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17571063_17571809_F

Intron Information:

Intron Rank:

140882

Intron Class:

major

Intron Phase:

Intron Coordinates:

17571063 - 17571809

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TATTCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTCCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

73.5

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.5

0.82

0.7

80.5

31.2

Minor 5ss

28.4

-2.5

2.9

31.8

42.6

Minor BPS

78.2

0.88

1.5

84.76

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041704

17562000 - 17572884

10885

ENSAPLT00000019496

17570522 - 17574182

3661