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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17571922_17572251_F

Intron Information:

Intron Rank:

140890

Intron Class:

major

Intron Phase:

Intron Coordinates:

17571922 - 17572251

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTATGAATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.1

30.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.3

0.55

66.7

42.9

Minor 5ss

40.1

-1.1

3.1

49.2

Minor BPS

58.2

0.34

1.7

77.48

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040373

17562000 - 17574182

12183