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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17571922_17572872_F

Intron Information:

Intron Rank:

140883

Intron Class:

major

Intron Phase:

Intron Coordinates:

17571922 - 17572872

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAG

U12 Branch Point Sequence:

TCTTAGGGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.1

30.7

Major BPS

55.1

0.13

1.5

42.7

Major PPT

82.8

0.74

0.8

81.8

30.3

Minor 5ss

40.1

-1.1

3.1

49.2

Minor BPS

37.2

-0.9

2.6

54.27

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041704

17562000 - 17572884

10885

ENSAPLT00000019496

17570522 - 17574182

3661