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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17698057_17723302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17698057 - 17723302

Intron Length:

25246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

GTGGCCGCGAGT

Flanking Amino Acid:

YEPHSIHAIHGPPPLSGSPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

80.1

0.68

0.8

77.6

31.2

Minor 5ss

39.7

-1.2

3.1

51.1

45.2

Minor BPS

38.9

-0.7

2.4

55.55

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015836

17626607 - 17762403

135797

ENSAPLT00000028479

17671432 - 17762403

90972

ENSAPLT00000020961

17626607 - 17762403

135797