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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17723506_17725395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17723506 - 17725395

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CCGGCTTCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TCCTCTTCACCC

Flanking Amino Acid:

SAARGLSPADVAHEHLKERG

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

69.9

34.9

Major BPS

77.5

0.68

79.6

Major PPT

61.9

0.27

57.2

38.6

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

50.2

-0

1.9

61.68

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028479

17671432 - 17762403

90972

ENSAPLT00000015836

17626607 - 17762403

135797