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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17725588_17735313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17725588 - 17735313

Intron Length:

9726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTTTTCTCCTCT

Flanking Amino Acid:

HLHEYLSPVDVSRFSSPRVT

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

85.6

0.8

0.7

80.7

24.6

Minor 5ss

32.5

-2

2.8

43.2

43.8

Minor BPS

42.2

-0.5

3.6

79.56

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028479

17671432 - 17762403

90972

ENSAPLT00000015836

17626607 - 17762403

135797