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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17743280_17746917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17743280 - 17746917

Intron Length:

3638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

TCTTCCAGGAGT

Flanking Amino Acid:

EYDTQEQLVHHINNDHIHGE

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

85.1

25.6

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

74.2

0.55

0.9

67.2

Minor 5ss

34.4

-1.8

2.9

46.9

41.8

Minor BPS

48.5

-0

2.1

72.95

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028479

17671432 - 17762403

90972

ENSAPLT00000020961

17626607 - 17762403

135797

ENSAPLT00000015836

17626607 - 17762403

135797