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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17755558_17758842_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17755558 - 17758842

Intron Length:

3285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCCCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

ACCTGTCCAACT

Flanking Amino Acid:

VKTIKTENSVMCQSSPGGQS

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

68.9

0.43

67.8

32.7

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

42.6

-0.4

2.1

58.67

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028479

17671432 - 17762403

90972

ENSAPLT00000020961

17626607 - 17762403

135797

ENSAPLT00000015836

17626607 - 17762403

135797