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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17860027_17862119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17860027 - 17862119

Intron Length:

2093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTACCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTTTCTTCTACC

Flanking Amino Acid:

TGIHVLVSNEMVQNFQDESC

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

81.3

0.7

0.8

30.5

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

63.1

0.4

1.9

36.5

Associated Gene:

Gene:

TFCP2L1

Ensembl Gene ID:

ENSAPLG00000015648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016325

17859521 - 17890942

31422