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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17865071_17865166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17865071 - 17865166

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCAATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTCAAGACCT

Flanking Amino Acid:

QVELLPPSNDHLLPSASIQD

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.8

0.51

0.9

67.9

37.8

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

46.2

-0.2

2.2

74.01

Associated Gene:

Gene:

TFCP2L1

Ensembl Gene ID:

ENSAPLG00000015648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016325

17859521 - 17890942

31422