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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17868269_17869483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17868269 - 17869483

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGCTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTGCTTATAG

Flanking Amino Acid:

SASCQIKVFKPKGADRKQKT

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.4

0.57

0.9

68.8

37.3

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

48.6

-0.2

2.2

60.34

47.2

Associated Gene:

Gene:

TFCP2L1

Ensembl Gene ID:

ENSAPLG00000015648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016325

17859521 - 17890942

31422