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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17872390_17886251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17872390 - 17886251

Intron Length:

13862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTAAACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GTTTCCTTAAAC

Flanking Amino Acid:

HEETLTYLNQGQSYEIRLLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

79.5

36.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

66.1

0.36

0.9

56.2

38.7

Minor 5ss

41.3

-1

3.7

63.6

48.1

Minor BPS

81.6

0.97

1.2

32.8

Associated Gene:

Gene:

TFCP2L1

Ensembl Gene ID:

ENSAPLG00000015648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016325

17859521 - 17890942

31422