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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17886404_17890880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17886404 - 17890880

Intron Length:

4477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTATGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTGTAACTAAAT

Flanking Amino Acid:

YNQHSTGSYLRDVLALPIFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

68.7

0.47

0.9

67.9

Major PPT

0.67

77.1

41.6

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

47.1

-0.1

2.2

72.79

43.1

Associated Gene:

Gene:

TFCP2L1

Ensembl Gene ID:

ENSAPLG00000015648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016325

17859521 - 17890942

31422