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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17917103_17927660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17917103 - 17927660

Intron Length:

10558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ACCTCATTAATG

Flanking Amino Acid:

LEAHKDSHKEVVRAAEEAAS

Intron Amino Acid Position:

1329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

80.3

0.68

0.9

73.9

35.4

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

58.1

0.12

1.7

58.58

43.5

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656