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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17939848_17941136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17939848 - 17941136

Intron Length:

1289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

GCATCTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCTTCCTGCATC

Flanking Amino Acid:

HLKNSSNTSVGSPSNTLGRT

Intron Amino Acid Position:

1054

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

0.9

64.8

33.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

61.2

0.25

1.1

53.5

45.6

Minor 5ss

26.4

-2.7

3.2

36.4

Minor BPS

57.6

0.22

1.9

70.86

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656