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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17941281_17945370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17941281 - 17945370

Intron Length:

4090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGACTAA

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

EGNLEEKCKQAAQIVLISLF

Intron Amino Acid Position:

1006

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

64.4

38.3

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

93.1

0.97

0.6

18.6

Minor 5ss

41.1

-1

3.3

54.8

49.4

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000044738

17912326 - 18048536

136211