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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17941281_17952839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17941281 - 17952839

Intron Length:

11559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

TEPKSSDVRKAAQIVLISLF

Intron Amino Acid Position:

1014

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

93.1

0.97

0.6

18.6

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036448

17912881 - 18048536

135656

ENSAPLT00000030590

17911881 - 18048536

136656