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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17956414_17959999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17956414 - 17959999

Intron Length:

3586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACCTTC

5'SS Class:

major

3'SS Sequence:

TTATTTATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTATCATTAATA

Flanking Amino Acid:

QNLLKSQRTLSRVELKRLCE

Intron Amino Acid Position:

823

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.2

69.2

38.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

83.3

0.75

0.8

82.5

33.6

Minor 5ss

48.5

-0.1

2.8

67.4

Minor BPS

74.2

0.76

1.5

81.78

32.9

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030590

17911881 - 18048536

136656

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000036448

17912881 - 18048536

135656