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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17963608_17974413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17963608 - 17974413

Intron Length:

10806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ATGCATTTAACA

Flanking Amino Acid:

RETSPNRIGLDRFGLGQPGR

Intron Amino Acid Position:

699

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

80.3

0.68

0.9

76.2

37.8

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

61.4

0.35

1.5

68.31

37.7

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017634

17911881 - 18048536

136656

ENSAPLT00000002324

17911881 - 18034699

122819

ENSAPLT00000036970

17911881 - 18048536

136656

ENSAPLT00000030590

17911881 - 18048536

136656