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Intron Name: Anas_platyrhynchos_platyrhynchos_7_17969309_17974413_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17969309 - 17974413

Intron Length:

5105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCATGCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCTCTGAAACT

Flanking Amino Acid:

RETSPNRIGLARSSRIPRPS

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

58.7

0.2

1.1

51.4

42.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

52.7

0.16

2.3

78.9

Associated Gene:

Gene:

CLASP1

Ensembl Gene ID:

ENSAPLG00000002082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044738

17912326 - 18048536

136211

ENSAPLT00000036448

17912881 - 18048536

135656